CNAnorm (version 1.18.0)

A normalization method for Copy Number Aberration in cancer samples

Description

Performs ratio, GC content correction and normalization of data obtained using low coverage (one read every 100-10,000 bp) high troughput sequencing. It performs a "discrete" normalization looking for the ploidy of the genome. It will also provide tumour content if at least two ploidy states can be found.

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Version

1.18.0

License

GPL-2

Maintainer

Last Published

August 6th, 2012

Functions in CNAnorm (1.18.0)