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MBmca (version 0.0.3-2)

Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R

Description

The MBmca package provides data sets and lightweight utilities for nucleic acid melting curve analysis and presentation on microbead surfaces.

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Version

Install

install.packages('MBmca')

Monthly Downloads

275

Version

0.0.3-2

License

GPL (>= 2)

Maintainer

Stefan Roediger

Last Published

April 25th, 2014

Functions in MBmca (0.0.3-2)

DMP

Bimodal melting curve experiment on the surface of microbeads.
DualHyb

Surface melting curve data from direct hybridization experiment of short oligonucleotide probes with bimodal melting curve pattern.
MFIerror

Multiple comparison of the temperature dependent variance of the refMFI
MultiMelt

Surface melting curve data from direct hybridization experiment of short oligonucleotides.
mcaSmoother

Function to preprocess melting curve data.
diffQ

Calculation of the melting temperature (Tm) from the first derivative
MBmca-package

Microbead Surface Nucleic Acid Melting Curve Analysis
diffQ2

Calculation of the melting temperatures (Tm, Tm1D2 and Tm2D2) from the first and the second derivative
mcaPeaks

Function to estimate the approximate local minima and maxima of melting curve data.