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csSAM (version 1.2.4)

csSAM - cell-specific Significance Analysis of Microarrays

Description

Cell-type specific differential expression of a microarray experiment of heterogeneous tissue samples, using SAM.

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Version

Install

install.packages('csSAM')

Monthly Downloads

7

Version

1.2.4

License

LGPL

Maintainer

Shai ShenOrr

Last Published

May 13th, 2013

Functions in csSAM (1.2.4)

fdrCsSAM

fdrCsSAM
csfit

csfit: Deconvolution from Known Cell Proportions
csSAM-internal

Internal csSAM functions
findSigGene

findSigGene
fdrSAM

fdrSAM
csSAM

csSAM
runSAM

runSAM
csSAM-package

Cell-specific Differential Expression (csSAM)
csSamWrapper

csSamWrapper function - performs entire functionality
plotCsSAM

plotcsSAM