csSAM v1.2.4

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csSAM - cell-specific Significance Analysis of Microarrays

Cell-type specific differential expression of a microarray experiment of heterogeneous tissue samples, using SAM.

Functions in csSAM

Name Description
fdrCsSAM fdrCsSAM
csfit csfit: Deconvolution from Known Cell Proportions
csSAM-internal Internal csSAM functions
findSigGene findSigGene
fdrSAM fdrSAM
csSAM csSAM
runSAM runSAM
csSAM-package Cell-specific Differential Expression (csSAM)
csSamWrapper csSamWrapper function - performs entire functionality
plotCsSAM plotcsSAM
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Details

Type Package
Date 2011-10-08
License LGPL
LazyLoad yes
Collate 'csfit.R' 'csSAM-package.R' 'csSAM.R' 'csSamWrapper.R' 'fdrCsSAM.R' 'fdrSAM.R' 'findSigGene.R' 'make.monotone.R' 'plotCsSAM.R' 'runSAM.R' 'ttest.func.R' 'varr.R'
Packaged 2013-05-13 13:41:47 UTC; renaud
NeedsCompilation no
Repository CRAN
Date/Publication 2013-05-13 17:39:59

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