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stats (version 3.2.2)

The R Stats Package

Description

R statistical functions.

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Version

Version

3.2.2

License

Part of R 3.2.2

Maintainer

R-core R-core@R-project.org

Last Published

December 12th, 2019

Functions in stats (3.2.2)

alias

Find Aliases (Dependencies) in a Model
acf2AR

Compute an AR Process Exactly Fitting an ACF
anova.glm

Analysis of Deviance for Generalized Linear Model Fits
acf

Auto- and Cross- Covariance and -Correlation Function Estimation
add1

Add or Drop All Possible Single Terms to a Model
aggregate

Compute Summary Statistics of Data Subsets
AIC

Akaike's An Information Criterion
anova.lm

ANOVA for Linear Model Fits
addmargins

Puts Arbitrary Margins on Multidimensional Tables or Arrays
anova

Anova Tables
aov

Fit an Analysis of Variance Model
ar.ols

Fit Autoregressive Models to Time Series by OLS
arima

ARIMA Modelling of Time Series
ansari.test

Ansari-Bradley Test
anova.mlm

Comparisons between Multivariate Linear Models
ar

Fit Autoregressive Models to Time Series
arima0

ARIMA Modelling of Time Series -- Preliminary Version
ARMAacf

Compute Theoretical ACF for an ARMA Process
arima.sim

Simulate from an ARIMA Model
approxfun

Interpolation Functions
ARMAtoMA

Convert ARMA Process to Infinite MA Process
biplot

Biplot of Multivariate Data
Binomial

The Binomial Distribution
asOneSidedFormula

Convert to One-Sided Formula
ave

Group Averages Over Level Combinations of Factors
Beta

The Beta Distribution
as.hclust

Convert Objects to Class hclust
bandwidth

Bandwidth Selectors for Kernel Density Estimation
bartlett.test

Bartlett Test of Homogeneity of Variances
binom.test

Exact Binomial Test
biplot.princomp

Biplot for Principal Components
cancor

Canonical Correlations
Chisquare

The (non-central) Chi-Squared Distribution
birthday

Probability of coincidences
Box.test

Box-Pierce and Ljung-Box Tests
chisq.test

Pearson's Chi-squared Test for Count Data
.checkMFClasses

Functions to Check the Type of Variables passed to Model Frames
case+variable.names

Case and Variable Names of Fitted Models
cmdscale

Classical (Metric) Multidimensional Scaling
Cauchy

The Cauchy Distribution
convolve

Convolution of Sequences via FFT
coef

Extract Model Coefficients
cophenetic

Cophenetic Distances for a Hierarchical Clustering
contrast

(Possibly Sparse) Contrast Matrices
contrasts

Get and Set Contrast Matrices
cor

Correlation, Variance and Covariance (Matrices)
confint

Confidence Intervals for Model Parameters
complete.cases

Find Complete Cases
cor.test

Test for Association/Correlation Between Paired Samples
constrOptim

Linearly Constrained Optimization
cpgram

Plot Cumulative Periodogram
delete.response

Modify Terms Objects
cutree

Cut a Tree into Groups of Data
df.residual

Residual Degrees-of-Freedom
deviance

Model Deviance
deriv

Symbolic and Algorithmic Derivatives of Simple Expressions
decompose

Classical Seasonal Decomposition by Moving Averages
density

Kernel Density Estimation
dendrapply

Apply a Function to All Nodes of a Dendrogram
cov.wt

Weighted Covariance Matrices
extractAIC

Extract AIC from a Fitted Model
ecdf

Empirical Cumulative Distribution Function
Distributions

Distributions in the stats package
eff.aovlist

Compute Efficiencies of Multistratum Analysis of Variance
embed

Embedding a Time Series
effects

Effects from Fitted Model
dist

Distance Matrix Computation
dummy.coef

Extract Coefficients in Original Coding
expand.model.frame

Add new variables to a model frame
diffinv

Discrete Integration: Inverse of Differencing
FDist

The F Distribution
fft

Fast Discrete Fourier Transform (FFT)
filter

Linear Filtering on a Time Series
fisher.test

Fisher's Exact Test for Count Data
glm.summaries

Accessing Generalized Linear Model Fits
glm

Fitting Generalized Linear Models
IQR

The Interquartile Range
glm.control

Auxiliary for Controlling GLM Fitting
getInitial

Get Initial Parameter Estimates
is.empty.model

Test if a Model's Formula is Empty
ks.test

Kolmogorov-Smirnov Tests
ksmooth

Kernel Regression Smoother
make.link

Create a Link for GLM Families
influence.measures

Regression Deletion Diagnostics
identify.hclust

Identify Clusters in a Dendrogram
factor.scope

Compute Allowed Changes in Adding to or Dropping from a Formula
medpolish

Median Polish of a Matrix
makepredictcall

Utility Function for Safe Prediction
median

Median Value
family

Family Objects for Models
lag

Lag a Time Series
friedman.test

Friedman Rank Sum Test
formula.nls

Extract Model Formula from nls Object
lowess

Scatter Plot Smoothing
Lognormal

The Log Normal Distribution
lag.plot

Time Series Lag Plots
lm.influence

Regression Diagnostics
lm

Fitting Linear Models
fivenum

Tukey Five-Number Summaries
fitted

Extract Model Fitted Values
GammaDist

The Gamma Distribution
Geometric

The Geometric Distribution
hclust

Hierarchical Clustering
heatmap

Draw a Heat Map
kernapply

Apply Smoothing Kernel
loadings

Print Loadings in Factor Analysis
kernel

Smoothing Kernel Objects
loess.control

Set Parameters for Loess
Hypergeometric

The Hypergeometric Distribution
HoltWinters

Holt-Winters Filtering
lm.summaries

Accessing Linear Model Fits
KalmanLike

Kalman Filtering
isoreg

Isotonic / Monotone Regression
na.contiguous

Find Longest Contiguous Stretch of non-NAs
lm.fit

Fitter Functions for Linear Models
na.action

NA Action
NLSstLfAsymptote

Horizontal Asymptote on the Left Side
NLSstClosestX

Inverse Interpolation
formula

Model Formulae
fligner.test

Fligner-Killeen Test of Homogeneity of Variances
ftable.formula

Formula Notation for Flat Contingency Tables
ftable

Flat Contingency Tables
kmeans

K-Means Clustering
interaction.plot

Two-way Interaction Plot
integrate

Integration of One-Dimensional Functions
kruskal.test

Kruskal-Wallis Rank Sum Test
listof

A Class for Lists of (Parts of) Model Fits
pairwise.prop.test

Pairwise comparisons for proportions
line

Robust Line Fitting
pairwise.t.test

Pairwise t tests
plot.ppr

Plot Ridge Functions for Projection Pursuit Regression Fit
plot.lm

Plot Diagnostics for an lm Object
print.ts

Printing and Formatting of Time-Series Objects
profile.nls

Method for Profiling nls Objects
predict.Arima

Forecast from ARIMA fits
proj

Projections of Models
print.power.htest

Print Methods for Hypothesis Tests and Power Calculation Objects
predict.glm

Predict Method for GLM Fits
predict.lm

Predict method for Linear Model Fits
predict.loess

Predict Loess Curve or Surface
quantile

Sample Quantiles
rect.hclust

Draw Rectangles Around Hierarchical Clusters
read.ftable

Manipulate Flat Contingency Tables
r2dtable

Random 2-way Tables with Given Marginals
SSasympOff

Self-Starting Nls Asymptotic Regression Model with an Offset
SSasympOrig

Self-Starting Nls Asymptotic Regression Model through the Origin
stat.anova

GLM Anova Statistics
start

Encode the Terminal Times of Time Series
ls.diag

Compute Diagnostics for lsfit Regression Results
ls.print

Print lsfit Regression Results
manova

Multivariate Analysis of Variance
mantelhaen.test

Cochran-Mantel-Haenszel Chi-Squared Test for Count Data
Normal

The Normal Distribution
nextn

Highly Composite Numbers
nlm

Non-Linear Minimization
order.dendrogram

Ordering or Labels of the Leaves in a Dendrogram
numericDeriv

Evaluate Derivatives Numerically
logLik

Extract Log-Likelihood
p.adjust

Adjust P-values for Multiple Comparisons
loglin

Fitting Log-Linear Models
mauchly.test

Mauchly's Test of Sphericity
mcnemar.test

McNemar's Chi-squared Test for Count Data
Multinom

The Multinomial Distribution
mood.test

Mood Two-Sample Test of Scale
offset

Include an Offset in a Model Formula
optimize

One Dimensional Optimization
oneway.test

Test for Equal Means in a One-Way Layout
optim

General-purpose Optimization
loess

Local Polynomial Regression Fitting
Logistic

The Logistic Distribution
lsfit

Find the Least Squares Fit
mahalanobis

Mahalanobis Distance
naprint

Adjust for Missing Values
model.matrix

Construct Design Matrices
model.extract

Extract Components from a Model Frame
plot.HoltWinters

Plot function for HoltWinters objects
NegBinomial

The Negative Binomial Distribution
plot.isoreg

Plot Method for isoreg Objects
power

Create a Power Link Object
predict.HoltWinters

Prediction Function for Fitted Holt-Winters Models
setNames

Set the Names in an Object
predict

Model Predictions
selfStart

Construct Self-starting Nonlinear Models
plot.acf

Plot Autocovariance and Autocorrelation Functions
spec.pgram

Estimate Spectral Density of a Time Series by a Smoothed Periodogram
nobs

Extract the Number of Observations from a Fit.
spec.ar

Estimate Spectral Density of a Time Series from AR Fit
power.prop.test

Power Calculations for Two-Sample Test for Proportions
plot.profile.nls

Plot a profile.nls Object
plot.density

Plot Method for Kernel Density Estimation
power.t.test

Power calculations for one and two sample t tests
model.tables

Compute Tables of Results from an Aov Model Fit
prop.trend.test

Test for trend in proportions
monthplot

Plot a Seasonal or other Subseries from a Time Series
na.fail

Handle Missing Values in Objects
nls.control

Control the Iterations in nls
naresid

Adjust for Missing Values
NLSstAsymptotic

Fit the Asymptotic Regression Model
pairwise.wilcox.test

Pairwise Wilcoxon Rank Sum Tests
pairwise.table

Tabulate p values for pairwise comparisons
Poisson

The Poisson Distribution
poisson.test

Exact Poisson tests
NLSstRtAsymptote

Horizontal Asymptote on the Right Side
stats-defunct

Defunct Functions in Package stats
stats-deprecated

Deprecated Functions in Package stats
SSgompertz

Self-Starting Nls Gompertz Growth Model
TDist

The Student t Distribution
t.test

Student's t-Test
ts-methods

Methods for Time Series Objects
ts

Time-Series Objects
plot.spec

Plotting Spectral Densities
var.test

F Test to Compare Two Variances
power.anova.test

Power Calculations for Balanced One-Way Analysis of Variance Tests
update

Update and Re-fit a Model Call
rWishart

Random Wishart Distributed Matrices
runmed

Running Medians -- Robust Scatter Plot Smoothing
SSfol

Self-Starting Nls First-order Compartment Model
smoothEnds

End Points Smoothing (for Running Medians)
sortedXyData

Create a sortedXyData Object
sd

Standard Deviation
symnum

Symbolic Number Coding
terms.object

Description of Terms Objects
terms

Model Terms
prop.test

Test of Equal or Given Proportions
supsmu

Friedman's SuperSmoother
Tukey

The Studentized Range Distribution
tsSmooth

Use Fixed-Interval Smoothing on Time Series
plot.stepfun

Plot Step Functions
PP.test

Phillips-Perron Test for Unit Roots
plot.ts

Plotting Time-Series Objects
ppoints

Ordinates for Probability Plotting
profile

Generic Function for Profiling Models
printCoefmat

Print Coefficient Matrices
preplot

Pre-computations for a Plotting Object
princomp

Principal Components Analysis
reshape

Reshape Grouped Data
residuals

Extract Model Residuals
ppr

Projection Pursuit Regression
prcomp

Principal Components Analysis
predict.smooth.spline

Predict from Smoothing Spline Fit
quade.test

Quade Test
qqnorm

Quantile-Quantile Plots
se.contrast

Standard Errors for Contrasts in Model Terms
reorder.default

Reorder Levels of a Factor
smooth

Tukey's (Running Median) Smoothing
smooth.spline

Fit a Smoothing Spline
replications

Number of Replications of Terms
reorder.dendrogram

Reorder a Dendrogram
relevel

Reorder Levels of Factor
shapiro.test

Shapiro-Wilk Normality Test
SignRank

Distribution of the Wilcoxon Signed Rank Statistic
SSmicmen

Self-Starting Nls Michaelis-Menten Model
SSweibull

Self-Starting Nls Weibull Growth Curve Model
stepfun

Step Functions - Creation and Class
summary.lm

Summarizing Linear Model Fits
scatter.smooth

Scatter Plot with Smooth Curve Fitted by Loess
stl

Seasonal Decomposition of Time Series by Loess
screeplot

Screeplots
SSfpl

Self-Starting Nls Four-Parameter Logistic Model
spec.taper

Taper a Time Series by a Cosine Bell
spectrum

Spectral Density Estimation
stats-package

The R Stats Package
step

Choose a model by AIC in a Stepwise Algorithm
toeplitz

Form Symmetric Toeplitz Matrix
time

Sampling Times of Time Series
Uniform

The Uniform Distribution
TukeyHSD

Compute Tukey Honest Significant Differences
SSlogis

Self-Starting Nls Logistic Model
weighted.residuals

Compute Weighted Residuals
predict.nls

Predicting from Nonlinear Least Squares Fits
SSbiexp

Self-Starting Nls Biexponential model
weights

Extract Model Weights
SSD

SSD Matrix and Estimated Variance Matrix in Multivariate Models
SSasymp

Self-Starting Nls Asymptotic Regression Model
splinefun

Interpolating Splines
summary.aov

Summarize an Analysis of Variance Model
summary.glm

Summarizing Generalized Linear Model Fits
summary.princomp

Summary method for Principal Components Analysis
summary.nls

Summarizing Non-Linear Least-Squares Model Fits
tsdiag

Diagnostic Plots for Time-Series Fits
summary.manova

Summary Method for Multivariate Analysis of Variance
ts.plot

Plot Multiple Time Series
wilcox.test

Wilcoxon Rank Sum and Signed Rank Tests
ts.union

Bind Two or More Time Series
stlmethods

Methods for STL Objects
Wilcoxon

Distribution of the Wilcoxon Rank Sum Statistic
termplot

Plot Regression Terms
StructTS

Fit Structural Time Series
terms.formula

Construct a terms Object from a Formula
varimax

Rotation Methods for Factor Analysis
weighted.mean

Weighted Arithmetic Mean
Weibull

The Weibull Distribution
vcov

Calculate Variance-Covariance Matrix for a Fitted Model Object
tsp

Tsp Attribute of Time-Series-like Objects
window

Time Windows
update.formula

Model Updating
uniroot

One Dimensional Root (Zero) Finding
C

Sets Contrasts for a Factor