DescTools v0.99.19

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by Andri Signorell

Tools for Descriptive Statistics

A collection of miscellaneous basic statistic functions and convenience wrappers for efficiently describing data. The author's intention was to create a toolbox, which facilitates the (notoriously time consuming) first descriptive tasks in data analysis, consisting of calculating descriptive statistics, drawing graphical summaries and reporting the results. The package contains furthermore functions to produce documents using MS Word (or PowerPoint) and functions to import data from Excel. Many of the included functions can be found scattered in other packages and other sources written partly by Titans of R. The reason for collecting them here, was primarily to have them consolidated in ONE instead of dozens of packages (which themselves might depend on other packages which are not needed at all), and to provide a common and consistent interface as far as function and arguments naming, NA handling, recycling rules etc. are concerned. Google style guides were used as naming rules (in absence of convincing alternatives). The 'camel style' was consequently applied to functions borrowed from contributed R packages as well.

Functions in DescTools

Name Description
as.matrix.xtabs Convert xtabs To matrix
AscToChar Convert ASCII Codes to Characters and Vice Versa
axTicks.POSIXct Compute Axis Tickmark Locations (For POSIXct Axis)
AxisBreak Place a Break Mark on an Axis
Assocs Association Measures
Benford Benford's Distribution
BarText Add Text to a Barplot
Asp Aspect Ratio
BartelsRankTest Bartels Rank Test
Atkinson Calculate the Atkinson Index
AUC Area Under the Curve
BoxCox Box Cox Transformation
BinTree Binary Tree
BinomCI Confidence Intervals for Binomial Proportions
BreslowDayTest Breslow-Day Test for Homogeneity of the Odds Ratios
Between, Outside Operators To Check, If a Value Lies Within Or Outside a Given Range
BootCI Simple Bootstrap Confidence Intervals
BinomDiffCI Confidence Interval for a Difference of Binomials
BinToDec Converts Numbers From Binmode, Octmode or Hexmode to Decimal and Vice Versa
BoxedText Add Text in a Box to a Plot
BoxCoxLambda Automatic Selection of Box Cox Transformation Parameter
CartToPol Transform Cartesian to Polar/Spherical Coordinates and Vice Versa
CatTable Function to write a table
BubbleLegend Add a Legend to a Bubble Plot
Canvas Canvas for Geometric Plotting
CorPart Find the Correlations for a Set x of Variables With Set y Removed
CochranQTest Cochran's Q test
CorPolychor Polychoric Correlation
CochranArmitageTest Cochran-Armitage Test for Trend
ColumnWrap ColumnWrap
CombPairs Get All Pairs Out of One or Two Sets of Elements
ClipToVect Reformat a Table in the Clipboard as Vector
Clockwise Calculates Begin and End Angle From a List of Given Angles in Clockwise Mode
ColToGrey Convert Colors to Grey/Grayscale
ColToHex Convert a Color Into Hex String
d.pizza Data pizza
ChooseColorDlg Display Color Dialog to Choose a Color
CCC Concordance Correlation Coefficient
Closest Find the Closest Value
d.periodic Periodic Table of Elements
Coalesce Return the First Element Not Being NA
ColToHsv R Color to HSV Conversion
ColToRgb Color to RGB Conversion
Association measures Cramer's V, Pearson's Contingency Coefficient and Phi Coefficient Yule's Q and Y, Tschuprow's T
CronbachAlpha Cronbach's Coefficient Alpha
BreuschGodfreyTest Breusch-Godfrey Test
ConDisPairs Concordant and Discordant Pairs
ColPicker Plot All Named R Colors
BrierScore Brier Score
ColorLegend Add a ColorLegend to a Plot
ConnLines Add Connection Lines to a Barplot
DescToolsOptions DescTools Options
DunnTest Dunn's Test of Multiple Comparisons
DunnettTest Dunnett's Test for Comparing Several Treatments With a Control
Datasets for Simulation Datasets for Probabilistic Simulation
DigitSum Calculate Digit Sum
Eps Greenhouse-Geisser And Huynh-Feldt Epsilons
ErrBars Add Error Bars to an Existing Plot
d.whisky Classification of Scotch Single Malts
Frac Fractional Part and Maximal Digits of a Numeric Value
Freq Frequency Table
HexToRgb Convert a Hexstring Color to a Matrix With Three Red/Green/Blue Rows
DrawEllipse Draw an Ellipse
DenseRank Dense Ranks
Hmean Harmonic Mean and Its Confidence Interval
Desc Describe Data
ExpFreq Expected Frequencies
Factorize Prime Factorization of Integers
DrawCircle Draw a Circle
GetNewPP Create a New PowerPoint Instance
GetNewWrd Create a New Word Instance
DrawBezier Draw a Bezier Curve
GiniSimpson Compute Gini-Simpson Coefficient
Gmean Geometric Mean and Standard Deviation
DivCoef Rao's Diversity Coefficient
DivCoefMax Maximal value of Rao's diversity coefficient also called quadratic entropy
Fibonacci Fibonacci Numbers
FctArgs Retrieve a Function's Arguments
FileOpenCmd Get Path of a Data File to Be Opened
DrawBand Draw Confidence Band
FindColor Get Color on a Defined Color Range
ICC Intraclass Correlations (ICC1, ICC2, ICC3 From Shrout and Fleiss)
HWZdata Get HWZ Datasets
Date Create a Date From Numeric Representation
Entropy Shannon Entropy and Mutual Information
FindCorr Determine Highly Correlated Variables
FixToTab Text to Table
GetNewXL Create a New Excel Instance
Gini Gini Coefficient
DurbinWatsonTest Durbin-Watson Test
Date Functions Basic Date Functions
HodgesLehmann Hodges-Lehmann Estimator of Location
HoeffD Matrix of Hoeffding's D Statistics
HosmerLemeshowTest Hosmer-Lemeshow Goodness of Fit Tests
Arrow Insert an Arrow
HmsToSec Convert h:m:s To/From Seconds
LogSt Started Logarithmic Transformation and Its Inverse
lines.lm Add a Linear Regression Line
lines.loess Add a Loess or a Spline Smoother
IsEuclid Is a Distance Matrix Euclidean?
IsOdd Checks If An Integer Is Even Or Odd
Lookup Look Up a Value In a Reference Vector
%c% Concatenates Two Strings Without Any Separator
AndersonDarlingTest Anderson-Darling Test of Goodness-of-Fit
AllDuplicated Index Vector of All Values Involved in Ties
DrawRegPolygon Draw Regular Polygon(s)
d.countries ISO 3166-1 Country Codes
GCD, LCM Greatest Common Divisor and Least Common Multiple
GeomTrans Geometric Transformations
Dummy Generate Dummy Codes for a Factor
d.diamonds Data diamonds
GoodmanKruskalGamma Goodman Kruskal's Gamma
GoodmanKruskalTau Goodman Kruskal's Tau
IsDate Check If an Object Is of Type Date
IsDichotomous Test If a Variable Contains Only Two Unique Values
Lc Lorenz Curve
LehmacherTest Lehmacher's Test for Marginal Homogenity
LineToUser Convert Line Coordinates To User Coordinates
MeanAD Mean Absolute Deviation From a Center Point
LinScale Linear Scaling
Mean Arithmetic Mean
Median Median Value
median.factor Median for Ordered Factors
Abind Combine Multidimensional Arrays
KendallTauB Kendall Tau-b
Abstract Abstract
DescTools Aliases Some Aliases Set for Convenience
NemenyiTest Nemenyi Test
KendallW Kendall's Coefficient of Concordance W
MoveAvg Moving Average
MultinomCI Confidence Intervals for Multinomial Proportions
PartitionBy PartitionBy Evaluates a Function Groupwise
PasswordDlg Password Dialog
PlotCorr Plot a Correlation Matrix
PlotMiss Plot Missing Data
PlotDev Plot to Device
PlotMatrix Scatterplot Matrix
Primes Find All Primes Less Than n
PpPlot Add Slides, Insert Texts and Plots to PowerPoint
PlotMultiDens Plot Multiple Density Curves
PlotPch Information Plots
Rev Reverse Elements of a Vector or the Rows/Columns of Matrices and Tables
reorder.factor Reorder the Levels of a Factor
SortMixed Order or Sort Strings With Embedded Numbers So That The Numbers Are In The Correct Order
SpearmanRho Spearman Rank Correlation
split.formula Formula Interface for Split
SplitPath Split Path In Drive, Path, Filename
StrRev Reverse a String
RoundTo Round to Multiple
SampleTwins Sample Twins
StrLeft, StrRight Returns the Left Or the Right Part Of a String
VarTest ChiSquare Test for One Variance and F Test to Compare Two Variances
VarCI Confidence Interval for the Variance
LeveneTest Levene's Test for Homogeneity of Variance
Some numeric checks Check a Vector For Being Numeric, Zero Or a Whole Number
JarqueBeraTest (Robust) Jarque Bera Test
%like% Like Operator
KappaM Kappa for m Raters
KendallTauA Kendall's Tau-a
HotellingsT2Test Hotelling's T2 Test
HuberM Safe (generalized) Huber M-Estimator of Location
AddClass Add and Remove Classes From an Object
IsPrime IsPrime Property
AddMonths Add a Month to a Date
List Variety Of Objects List Objects, Functions Or Data in a Package
Measures of Accuracy Measures of Accuracy
Lambda Goodman Kruskal Lambda
IsValidWrd Check Word Pointer
Extremes Kth Smallest/Largest Values
LOCF Last Observation Carried Forward
LOF Local Outlier Factor
MeanCI Confidence Interval for the Mean
%nin% Find Matching (or Non-Matching) Elements
OddsRatio Odds Ratio Estimation and Confidence Intervals
PlotCandlestick Plot Candlestick Chart
ParseSASDatalines Parse a SAS Dataline Command
ParseFormula Parse a Formula and Create a Model Frame
Midx Find the Midpoints of a Numeric Vector
MixColor Compute the Convex Combination of Two Colors
MeanDiffCI Confidence Interval For Difference of Means
PlotCirc Plot Circular Plot
PlotMonth Plot Monthly or Seasonal Effects Of a Univariate Time Series
PlotLog Logarithmic Plot
PlotMarDens Scatterplot With Marginal Densities
PlotQQ QQ-Plot for Any Distribution
ORToRelRisk Transform Odds Ratio to Relative Risk
Outlier Outlier
MHChisqTest Mantel-Haenszel Chi-Square Test
MedianCI Confidence Interval for the Median
PlotMosaic Mosaic Plots
PlotTernary Ternary or Triangular Plots
PseudoR2 Pseudo R2 Statistics
PtInPoly Point in Polygon
XLDateToPOSIXct Convert Excel Dates to POSIXct
wdConst Word VBA Constants
PDFManual Get PDF Manual Of a Package From CRAN
PlotFun Plot a Function
PlotArea Create an Area Plot
PlotACF Combined Plot of a Time Series and Its ACF and PACF
WrdTableBorders Draw Borders to a Word Table
Vigenere Vigenere Cypher
RomanToInt Convert Roman Numerals to Integers
%overlaps% Determines If And How Extensively Two Date Ranges Overlap
PageTest Exact Page Test for Ordered Alternatives
PlotPyramid Draw a Back To Back Pyramid Plot
RndPairs Create Pairs of Correlated Random Numbers
RobScale Robust Scaling With Median and Mad
PlotLinesA Plot Lines
PlotPolar Plot Values on a Circular Grid
Permn Number and Samples for Permutations or Combinations of a Set
Phrase Phrasing Results of t-Test
Recycle Recyle a List of Elements
PlotECDF Empirical Cumulative Distribution Function
PlotDot Cleveland's Dot Plots
PolarGrid Plot a Grid in Polar Coordinates
PoissonCI Poisson Confidence Interval
StrCap Capitalize the First Letter of a String
Rotate Rotate a Geometric Structure
Recode Recode a Factor
StrChop Split a String in a Number of Pieces With Fixed Length
TMod Comparison Table For Linear Models
TOne Create Table One Describing Baseline Characteristics
WrdStyle Get or Set the Style in Word
Trim Trim a Vector
TukeyBiweight Calculate Tukey's Biweight Robust Mean
WrdTable Insert a Table in a Word Document
Measures of Shape Skewness and Kurtosis
SmoothSpline Formula Interface For smooth.spline
Str Compactly Display the Structure of an Arbitrary R Object
StrAbbr String Abbreviation
StrTrim Remove Leading/Trailing Whitespace From A String
StrTrunc Truncate Strings and Add Ellipses If a String is Truncated.
TextContrastColor Choose Textcolor Depending on Background Color
TextToTable Converts String To a Table
ToLong, ToWide Reshape a Vector From Long to Wide Shape Or Vice Versa
ToWrd Send Objects to Word
PlotTreemap Create a Treemap
PlotVenn Plot a Venn Diagram
Quantile Weighted Quantiles
Range (Robust) Range
pRevGumbel "Reverse" Gumbel Distribution Functions
SD Standard Deviation
RgbToCol Find the Named R-Color Which Is Nearest to a Given RGB-Color
SelectVarDlg Select Elements of a Set by Click
SiegelTukeyTest Siegel-Tukey Test For Equality In Variability
SignTest Sign Test
Agree Raw Simple And Extended Percentage Agreement
CohenD Cohen's Effect Size
AddMonthsYM Add a Month to a Date
CollapseTable Collapse Levels of a Table
Contrasts Pairwise Contrasts
Cor Correlation, Variance and Covariance (Matrices)
day.name Build-in Constants Extension
CutQ Create a Factor Variable Using the Quantiles of a Continuous Variable
Cstat C Statistic (Area Under the ROC Curve)
DegToRad Convert Degrees to Radians and Vice Versa
SaveAsDlg Save R Objects By Choosing a File Interactively
ScheffeTest Scheffe Test for Pairwise and Otherwise Comparisons
Some Return Some Randomly Chosen Elements of an Object
Sort Sort a Vector, a Matrix, a Table or a Data.frame
StrAlign String Alignment
Strata Stratified Sampling
StrDist Compute Distances Between Strings
StrExtract Extract Part of a String
StuartTauC Stuart $Tau C$
SysInfo System Information
WrdInsertBookmark Insert a Bookmark, Goto Bookmark and Update the Text of a Bookmark
VecRot Vector Rotation
VIF Variance Inflation Factors
WrdMergeCells Merges Cells Of a Defined Word Table Range
WrdParagraphFormat Get or Set the Paragraph Format in Word
WrdPlot Insert Active Plot to Word
SpreadOut Spread Out a Vector of Numbers To a Minimum Interval
StrPad Pad a String With Justification
Stamp Date/Time/Directory Stamp the Current Plot
StrIsNumeric Does a String Contain Only Numeric Data
StrVal Extract All Numeric Values From a String
WrdCellRange Return the Cell Range Of a Word Table
XLGetRange Import Data Directly From Excel
WrdCaption Insert Caption to Word
StuartMaxwellTest Stuart-Maxwell Marginal Homogeneity Test
YuenTTest Yuen t-Test For Trimmed Means
XLView Use Excel as Viewer for a Data.Frame
Winsorize Winsorize
WoolfTest Woolf Test
Xplore Interactive Graphical Data Explorer
ZeroIfNA Replace NAs by 0
DoCall Fast Alternative To The Internal do.call
Zodiac Calculate the Zodiac of a Date
DrawArc Draw Elliptic or Circular Arc(s)
EtaSq Effect Size Calculations for ANOVAs
IdentifyA Identify Points in Plot Lying Within a Rectangle or Polygon
ImportFileDlg Import File In Foreign Format
Exec Execute a Command Given As String
InDots Is a Specific Argument in the Dots-Arguments?
Keywords List Keywords For R Manual Pages
GTest G-Test for Count Data
HexToCol Identify Closest Match to a Color Given by a Hexadecimal String
identify.formula Identify Points In a Plot Using a Formula
Label, Unit Label, Unit Attribute of an Object
Logit Generalized Logit and Inverse Logit Function
Mar Set Plot Margins
matpow Matrix Power
LogLin Log Linear Hybrid, Generalized Log
Mode Mode
MosesTest Moses Test of Extreme Reactions
PairApply Pairwise Calculations
DescTools Palettes Some Custom Palettes
PearsonTest Pearson Chi-Square Test for Normality
PercTable Percentage Table
PlotBag PlotBag, a Bivariate Boxplot
PlotBubble Draw a Bubble Plot
PlotFaces Chernoff Faces
PlotFdist Frequency Distribution Plot
power.chisq.test Power Calculations for ChiSquared Tests
RelRisk Relative Risk
PlotViolin Plot Violins Instead of Boxplots
PlotWeb Plot a Web of Connected Points
PostHocTest Post-Hoc Tests
Rename Change Names of a Named Object
SetAlpha Add an Alpha Channel To a Color
SetRowNames Set the Row Names and Column Names in an Object
Shade Produce a Shaded Curve
ShapiroFranciaTest Shapiro-Francia Test for Normality
Unwhich Inverse Which
Untable Recover Original Data From Contingency Table
StrRep Repeat the Elements of a Character Vector
TheilU Theil's U Index of Inequality
TitleRect Plot Boxed Annotation
StrPos Find Position of First Occurrence Of a String
WrdFont Get or Set the Font in Word
WrdFormatCells Format Cells Of a Word Table
ZTest Z Test for Known Population Standard Deviation
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Details

Type Package
Date 2017-02-09
LinkingTo Rcpp, BH
License GPL (>= 2)
LazyLoad yes
LazyData yes
ByteCompile yes
NeedsCompilation yes
Additional_repositories http://www.stats.ox.ac.uk/pub/RWin/
SystemRequirements C++11
Packaged 2017-02-09 18:25:01 UTC; Andri
Repository CRAN
Date/Publication 2017-02-11 10:04:05
depends base , R (>= 3.1.1) , stats
linkingto BH
imports boot , expm , foreign , graphics , grDevices , manipulate , MASS , methods , mvtnorm , Rcpp (>= 0.11.5) , utils
suggests RDCOMClient , tcltk
Contributors Yulia Gel, David Mitchell, Kamil Barton, Stephane Champely, Leanne Chhay, Markus Huerzeler, Daniel Malter, Yongyi Min, Markus Naepflin, Michael Smithson, Yves Tille, Stefan Wellek, Detlew Labes, Friederich Leisch, George Marsaglia, John Marsaglia, Nanina Anderegg, Clint Cummins, Dong Li, Hong Ooi, Pete Hurd, Matthias Kohl, Bill Venables, Rob Hyndman, David Meyer, Romain Francois, Dirk Eddelbuettel, Kevin Ushey, Brian Ripley, Ben Bolker, Jim Lemon, John Verzani, Tony Plate, Michael Friendly, Richard Heiberger, Torsten Hothorn, Achim Zeileis, Hadley Wickham, Klaus Nordhausen, Terry Therneau, Martin Maechler, Nick Parsons, Venkatraman Seshan, Tal Galili, Sandrine Pavoine, Gregory Warnes, Max Kuhn, Jeremy VanDerWal, John Fox, Michael Dewey, Greg Snow, Andreas Alfons, Charles Dupont, Peter Wolf, Werner Stahel, Arni Magnusson, Tyler Rinker, Michael Hoehle, Gabor Grothendieck, Henric Nilsson, Derek Ogle, Matthias Templ, Giovanni Millo, Kamil Erguler, Andri Includes R source code, or previously published by, Tomas Aragon, Antti Arppe, Adrian Baddeley, Frederico Caeiro, Daniel Chessel, Harold Doran, Stephane Dray, Jeff Enos, Claus Ekstrom, Martin Elff, Matthias Gamer, Joseph Gastwirth, Juergen Gross, Frank Harrell Jr, Christian Hoffmann, Wallace Hui, Pablo Villacorta Iglesias, Mikko Korpela, Alina Matei, Weiwen Miao, Daniel Navarro, Roland Rapold, William Revelle, Caroline Rodriguez, Mark Stevenson, Adrian Trapletti, Rand Wilcox, Daniel Wollschlaeger, Thomas Yee, Richard Farebrother, Nathan Russell, Nick Sabbe

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