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stats (version 3.5.0)

The R Stats Package

Description

R statistical functions.

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Version

Version

3.5.0

License

Part of R 3.5.0

Last Published

December 12th, 2019

Functions in stats (3.5.0)

SSasympOrig

Self-Starting Nls Asymptotic Regression Model through the Origin
SSgompertz

Self-Starting Nls Gompertz Growth Model
SSfpl

Self-Starting Nls Four-Parameter Logistic Model
Uniform

The Uniform Distribution
Weibull

The Weibull Distribution
anova.mlm

Comparisons between Multivariate Linear Models
ansari.test

Ansari-Bradley Test
asOneSidedFormula

Convert to One-Sided Formula
ave

Group Averages Over Level Combinations of Factors
coef

Extract Model Coefficients
complete.cases

Find Complete Cases
cor

Correlation, Variance and Covariance (Matrices)
cor.test

Test for Association/Correlation Between Paired Samples
df.residual

Residual Degrees-of-Freedom
Binomial

The Binomial Distribution
Cauchy

The Cauchy Distribution
AIC

Akaike's An Information Criterion
ARMAacf

Compute Theoretical ACF for an ARMA Process
GammaDist

The Gamma Distribution
IQR

The Interquartile Range
KalmanLike

Kalman Filtering
Normal

The Normal Distribution
Poisson

The Poisson Distribution
Geometric

The Geometric Distribution
NLSstRtAsymptote

Horizontal Asymptote on the Right Side
SSweibull

Self-Starting Nls Weibull Growth Curve Model
diffinv

Discrete Integration: Inverse of Differencing
SignRank

Distribution of the Wilcoxon Signed Rank Statistic
addmargins

Puts Arbitrary Margins on Multidimensional Tables or Arrays
effects

Effects from Fitted Model
NegBinomial

The Negative Binomial Distribution
embed

Embedding a Time Series
aggregate

Compute Summary Statistics of Data Subsets
SSfol

Self-Starting Nls First-order Compartment Model
SSbiexp

Self-Starting Nls Biexponential model
acf2AR

Compute an AR Process Exactly Fitting an ACF
formula.nls

Extract Model Formula from nls Object
friedman.test

Friedman Rank Sum Test
add1

Add or Drop All Possible Single Terms to a Model
anova.glm

Analysis of Deviance for Generalized Linear Model Fits
ftable

Flat Contingency Tables
ftable.formula

Formula Notation for Flat Contingency Tables
aov

Fit an Analysis of Variance Model
integrate

Integration of One-Dimensional Functions
anova.lm

ANOVA for Linear Model Fits
bandwidth

Bandwidth Selectors for Kernel Density Estimation
interaction.plot

Two-way Interaction Plot
line

Robust Line Fitting
approxfun

Interpolation Functions
bartlett.test

Bartlett Test of Homogeneity of Variances
listof

A Class for Lists of (Parts of) Model Fits
chisq.test

Pearson's Chi-squared Test for Count Data
arima

ARIMA Modelling of Time Series
Box.test

Box-Pierce and Ljung-Box Tests
arima.sim

Simulate from an ARIMA Model
cancor

Canonical Correlations
loglin

Fitting Log-Linear Models
lowess

Scatter Plot Smoothing
contrast

(Possibly Sparse) Contrast Matrices
mcnemar.test

McNemar's Chi-squared Test for Count Data
contrasts

Get and Set Contrast Matrices
deriv

Symbolic and Algorithmic Derivatives of Simple Expressions
cov.wt

Weighted Covariance Matrices
Chisquare

The (non-central) Chi-Squared Distribution
cmdscale

Classical (Metric) Multidimensional Scaling
deviance

Model Deviance
Distributions

Distributions in the stats package
cpgram

Plot Cumulative Periodogram
dist

Distance Matrix Computation
cutree

Cut a Tree into Groups of Data
dummy.coef

Extract Coefficients in Original Coding
HoltWinters

Holt-Winters Filtering
decompose

Classical Seasonal Decomposition by Moving Averages
fligner.test

Fligner-Killeen Test of Homogeneity of Variances
Hypergeometric

The Hypergeometric Distribution
SSD

SSD Matrix and Estimated Variance Matrix in Multivariate Models
getInitial

Get Initial Parameter Estimates
formula

Model Formulae
SSasymp

Self-Starting Nls Asymptotic Regression Model
expand.model.frame

Add new variables to a model frame
extractAIC

Extract AIC from a Fitted Model
SSlogis

Self-Starting Nls Logistic Model
kmeans

K-Means Clustering
SSmicmen

Self-Starting Nls Michaelis-Menten Model
family

Family Objects for Models
glm

Fitting Generalized Linear Models
kruskal.test

Kruskal-Wallis Rank Sum Test
median

Median Value
lm.summaries

Accessing Linear Model Fits
Wilcoxon

Distribution of the Wilcoxon Rank Sum Statistic
fft

Fast Discrete Fourier Transform (FFT)
glm.control

Auxiliary for Controlling GLM Fitting
lm.fit

Fitter Functions for Linear Models
acf

Auto- and Cross- Covariance and -Correlation Function Estimation
ar

Fit Autoregressive Models to Time Series
mood.test

Mood Two-Sample Test of Scale
glm.summaries

Accessing Generalized Linear Model Fits
loess.control

Set Parameters for Loess
na.action

NA Action
optimize

One Dimensional Optimization
logLik

Extract Log-Likelihood
mantelhaen.test

Cochran-Mantel-Haenszel Chi-Squared Test for Count Data
order.dendrogram

Ordering or Labels of the Leaves in a Dendrogram
ar.ols

Fit Autoregressive Models to Time Series by OLS
plot.isoreg

Plot Method for isoreg Objects
arima0

ARIMA Modelling of Time Series -- Preliminary Version
ks.test

Kolmogorov-Smirnov Tests
case+variable.names

Case and Variable Names of Fitted Models
as.hclust

Convert Objects to Class hclust
plot.lm

Plot Diagnostics for an lm Object
mauchly.test

Mauchly's Test of Sphericity
ksmooth

Kernel Regression Smoother
model.tables

Compute Tables of Results from an Aov Model Fit
.checkMFClasses

Functions to Check the Type of Variables passed to Model Frames
lag

Lag a Time Series
monthplot

Plot a Seasonal or other Subseries from a Time Series
nlminb

Optimization using PORT routines
lag.plot

Time Series Lag Plots
confint

Confidence Intervals for Model Parameters
nls

Nonlinear Least Squares
constrOptim

Linearly Constrained Optimization
dendrogram

General Tree Structures
lsfit

Find the Least Squares Fit
plot.spec

Plotting Spectral Densities
pairwise.wilcox.test

Pairwise Wilcoxon Rank Sum Tests
density

Kernel Density Estimation
factanal

Factor Analysis
plot.HoltWinters

Plot function for HoltWinters objects
plot.stepfun

Plot Step Functions
plot.ts

Plotting Time-Series Objects
poisson.test

Exact Poisson tests
power.t.test

Power calculations for one and two sample t tests
mad

Median Absolute Deviation
ARMAtoMA

Convert ARMA Process to Infinite MA Process
Beta

The Beta Distribution
factor.scope

Compute Allowed Changes in Adding to or Dropping from a Formula
medpolish

Median Polish (Robust Twoway Decomposition) of a Matrix
Logistic

The Logistic Distribution
ppoints

Ordinates for Probability Plotting
Lognormal

The Log Normal Distribution
NLSstClosestX

Inverse Interpolation
predict.smooth.spline

Predict from Smoothing Spline Fit
ppr

Projection Pursuit Regression
filter

Linear Filtering on a Time Series
preplot

Pre-computations for a Plotting Object
NLSstLfAsymptote

Horizontal Asymptote on the Left Side
prop.trend.test

Test for trend in proportions
model.extract

Extract Components from a Model Frame
StructTS

Fit Structural Time Series
qqnorm

Quantile-Quantile Plots
fisher.test

Fisher's Exact Test for Count Data
TDist

The Student t Distribution
Tukey

The Studentized Range Distribution
TukeyHSD

Compute Tukey Honest Significant Differences
identify.hclust

Identify Clusters in a Dendrogram
influence.measures

Regression Deletion Diagnostics
alias

Find Aliases (Dependencies) in a Model
nextn

Highly Composite Numbers
anova

Anova Tables
biplot

Biplot of Multivariate Data
binom.test

Exact Binomial Test
biplot.princomp

Biplot for Principal Components
relevel

Reorder Levels of Factor
nlm

Non-Linear Minimization
princomp

Principal Components Analysis
PP.test

Phillips-Perron Test for Unit Roots
kernapply

Apply Smoothing Kernel
print.power.htest

Print Methods for Hypothesis Tests and Power Calculation Objects
oneway.test

Test for Equal Means in a One-Way Layout
r2dtable

Random 2-way Tables with Given Marginals
rWishart

Random Wishart Distributed Matrices
reorder.dendrogram

Reorder a Dendrogram
birthday

Probability of coincidences
kernel

Smoothing Kernel Objects
lm

Fitting Linear Models
convolve

Convolution of Sequences via FFT
lm.influence

Regression Diagnostics
optim

General-purpose Optimization
cophenetic

Cophenetic Distances for a Hierarchical Clustering
ls.diag

Compute Diagnostics for lsfit Regression Results
ls.print

Print lsfit Regression Results
pairwise.t.test

Pairwise t tests
pairwise.table

Tabulate p values for pairwise comparisons
delete.response

Modify Terms Objects
model.frame

Extracting the Model Frame from a Formula or Fit
model.matrix

Construct Design Matrices
na.contiguous

Find Longest Contiguous Stretch of non-NAs
reorder.default

Reorder Levels of a Factor
na.fail

Handle Missing Values in Objects
power.anova.test

Power Calculations for Balanced One-Way Analysis of Variance Tests
nls.control

Control the Iterations in nls
power.prop.test

Power Calculations for Two-Sample Test for Proportions
dendrapply

Apply a Function to All Nodes of a Dendrogram
replications

Number of Replications of Terms
ecdf

Empirical Cumulative Distribution Function
eff.aovlist

Compute Efficiencies of Multistratum Analysis of Variance
nobs

Extract the Number of Observations from a Fit.
fitted

Extract Model Fitted Values
p.adjust

Adjust P-values for Multiple Comparisons
pairwise.prop.test

Pairwise comparisons for proportions
plot.ppr

Plot Ridge Functions for Projection Pursuit Regression Fit
fivenum

Tukey Five-Number Summaries
plot.profile.nls

Plot a profile.nls Object
smoothEnds

End Points Smoothing (for Running Medians)
sortedXyData

Create a sortedXyData Object
prcomp

Principal Components Analysis
heatmap

Draw a Heat Map
hclust

Hierarchical Clustering
is.empty.model

Test if a Model's Formula is Empty
predict.HoltWinters

Prediction Function for Fitted Holt-Winters Models
profile

Generic Function for Profiling Models
isoreg

Isotonic / Monotone Regression
loadings

Print Loadings in Factor Analysis
profile.nls

Method for Profiling nls Objects
loess

Local Polynomial Regression Fitting
spec.taper

Taper a Time Series by a Cosine Bell
mahalanobis

Mahalanobis Distance
predict.glm

Predict Method for GLM Fits
make.link

Create a Link for GLM Families
quade.test

Quade Test
predict.lm

Predict method for Linear Model Fits
predict.loess

Predict Loess Curve or Surface
makepredictcall

Utility Function for Safe Prediction
smooth

Tukey's (Running Median) Smoothing
predict.nls

Predicting from Nonlinear Least Squares Fits
smooth.spline

Fit a Smoothing Spline
spectrum

Spectral Density Estimation
manova

Multivariate Analysis of Variance
quantile

Sample Quantiles
read.ftable

Manipulate Flat Contingency Tables
stats-deprecated

Deprecated Functions in Package stats
naprint

Adjust for Missing Values
naresid

Adjust for Missing Values
rect.hclust

Draw Rectangles Around Hierarchical Clusters
stats-package

The R Stats Package
screeplot

Screeplots
numericDeriv

Evaluate Derivatives Numerically
offset

Include an Offset in a Model Formula
summary.manova

Summary Method for Multivariate Analysis of Variance
summary.lm

Summarizing Linear Model Fits
sd

Standard Deviation
stl

Seasonal Decomposition of Time Series by Loess
plot.acf

Plot Autocovariance and Autocorrelation Functions
poly

Compute Orthogonal Polynomials
stlmethods

Methods for STL Objects
power

Create a Power Link Object
plot.density

Plot Method for Kernel Density Estimation
reshape

Reshape Grouped Data
termplot

Plot Regression Terms
t.test

Student's t-Test
predict

Model Predictions
sigma

Extract Residual Standard Deviation 'Sigma'
simulate

Simulate Responses
predict.Arima

Forecast from ARIMA fits
ts.union

Bind Two or More Time Series
print.ts

Printing and Formatting of Time-Series Objects
stat.anova

GLM Anova Statistics
stats-defunct

Defunct Functions in Package stats
residuals

Extract Model Residuals
supsmu

Friedman's SuperSmoother
symnum

Symbolic Number Coding
setNames

Set the Names in an Object
shapiro.test

Shapiro-Wilk Normality Test
tsdiag

Diagnostic Plots for Time-Series Fits
proj

Projections of Models
printCoefmat

Print Coefficient Matrices
summary.princomp

Summary method for Principal Components Analysis
summary.nls

Summarizing Non-Linear Least-Squares Model Fits
terms.object

Description of Terms Objects
tsSmooth

Use Fixed-Interval Smoothing on Time Series
prop.test

Test of Equal or Given Proportions
time

Sampling Times of Time Series
weights

Extract Model Weights
runmed

Running Medians -- Robust Scatter Plot Smoothing
scatter.smooth

Scatter Plot with Smooth Curve Fitted by Loess
tsp

Tsp Attribute of Time-Series-like Objects
vcov

Calculate Variance-Covariance Matrix for a Fitted Model Object
spec.ar

Estimate Spectral Density of a Time Series from AR Fit
spec.pgram

Estimate Spectral Density of a Time Series by a Smoothed Periodogram
window

Time Windows
ts.plot

Plot Multiple Time Series
step

Choose a model by AIC in a Stepwise Algorithm
ts

Time-Series Objects
se.contrast

Standard Errors for Contrasts in Model Terms
stepfun

Step Functions - Creation and Class
wilcox.test

Wilcoxon Rank Sum and Signed Rank Tests
xtabs

Cross Tabulation
toeplitz

Form Symmetric Toeplitz Matrix
selfStart

Construct Self-starting Nonlinear Models
ts-methods

Methods for Time Series Objects
varimax

Rotation Methods for Factor Analysis
uniroot

One Dimensional Root (Zero) Finding
update

Update and Re-fit a Model Call
splinefun

Interpolating Splines
C

Sets Contrasts for a Factor
start

Encode the Terminal Times of Time Series
summary.aov

Summarize an Analysis of Variance Model
summary.glm

Summarizing Generalized Linear Model Fits
terms

Model Terms
terms.formula

Construct a terms Object from a Formula
weighted.mean

Weighted Arithmetic Mean
update.formula

Model Updating
var.test

F Test to Compare Two Variances
weighted.residuals

Compute Weighted Residuals
Exponential

The Exponential Distribution
FDist

The F Distribution
Multinom

The Multinomial Distribution
NLSstAsymptotic

Fit the Asymptotic Regression Model
SSasympOff

Self-Starting Nls Asymptotic Regression Model with an Offset